R Graphics

Insert image in R rmarkdown

![Caption for the Picture](path to the image file)
Sample Image

Sample Image

ggplot

Violin Plot

Cell Plot

  • Plot discrete daily progression states

Progression Bar Plot

plotly

Animation

R sessionInfo

R version 4.2.0 (2022-04-22) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 20.04.3 LTS

Matrix products: default BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.9.0 LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.9.0

locale: [1] LC_CTYPE=C.UTF-8 LC_NUMERIC=C LC_TIME=C.UTF-8
[4] LC_COLLATE=C.UTF-8 LC_MONETARY=C.UTF-8 LC_MESSAGES=C.UTF-8
[7] LC_PAPER=C.UTF-8 LC_NAME=C LC_ADDRESS=C
[10] LC_TELEPHONE=C LC_MEASUREMENT=C.UTF-8 LC_IDENTIFICATION=C

attached base packages: [1] stats graphics grDevices utils datasets methods base

other attached packages: [1] gapminder_0.3.0 gifski_1.6.6-1 Wu_0.0.0.9000
[4] flexdashboard_0.5.2 lme4_1.1-29 Matrix_1.4-0
[7] mgcv_1.8-38 nlme_3.1-152 png_0.1-7
[10] scales_1.2.0 nnet_7.3-16 labelled_2.9.1
[13] kableExtra_1.3.4 plotly_4.10.0 gridExtra_2.3
[16] ggplot2_3.3.6 DT_0.23 tableone_0.13.2
[19] magrittr_2.0.3 lubridate_1.8.0 dplyr_1.0.9
[22] plyr_1.8.7 data.table_1.14.2 rmdformats_1.0.4
[25] knitr_1.39

loaded via a namespace (and not attached): [1] httr_1.4.3 sass_0.4.1 tidyr_1.2.0 jsonlite_1.8.0
[5] viridisLite_0.4.0 splines_4.2.0 bslib_0.3.1 highr_0.9
[9] yaml_2.3.5 pillar_1.7.0 lattice_0.20-45 glue_1.6.2
[13] digest_0.6.29 rvest_1.0.2 minqa_1.2.4 colorspace_2.0-3 [17] htmltools_0.5.2 survey_4.1-1 pkgconfig_2.0.3 haven_2.5.0
[21] bookdown_0.27 purrr_0.3.4 webshot_0.5.3 svglite_2.1.0
[25] tibble_3.1.7 farver_2.1.0 generics_0.1.2 ellipsis_0.3.2
[29] withr_2.5.0 lazyeval_0.2.2 cli_3.3.0 survival_3.2-13
[33] crayon_1.5.1 evaluate_0.15 fansi_1.0.3 MASS_7.3-54
[37] forcats_0.5.1 xml2_1.3.3 tools_4.2.0 hms_1.1.1
[41] mitools_2.4 lifecycle_1.0.1 stringr_1.4.0 munsell_0.5.0
[45] compiler_4.2.0 jquerylib_0.1.4 systemfonts_1.0.4 rlang_1.0.2
[49] grid_4.2.0 nloptr_2.0.3 rstudioapi_0.13 htmlwidgets_1.5.4 [53] labeling_0.4.2 rmarkdown_2.14 boot_1.3-28 gtable_0.3.0
[57] DBI_1.1.2 R6_2.5.1 fastmap_1.1.0 utf8_1.2.2
[61] stringi_1.7.6 Rcpp_1.0.8.3 vctrs_0.4.1 tidyselect_1.1.2 [65] xfun_0.31